OMERO.web extensions to view data

OMERO.web is a flexible Django-based Web platform offering extension points. Those extensions are not installed by default when deploying OMERO. They require some additional setup steps.

All the Web extensions can be installed using pip. Check each app for configuration details.

OMERO.figure

OMERO.figure is a popular tool for creating figures from Images in OMERO. Image metadata can be used to facilitate figure creation. For more information, see https://github.com/ome/omero-figure.

OMERO.FPBioimage

OMERO.FPBioimage is a volumetric visualization tool. For more information, see https://github.com/ome/omero-fpbioimage.

OMERO.iviewer

We introduce OMERO.iviewer, a 2D viewer which can open and browse multi-t, multi-z and multi-channel images and allows to draw and edit Regions of Interest (ROIs) and perform some rudimentary image analysis. It also offers the ability to view several images at the same time and synchronize the view. For more information, see https://github.com/ome/omero-iviewer.

OMERO.parade

OMERO.parade is a data mining tool. For more information, see https://github.com/ome/omero-parade.