Orbit is a free open-source software with the focus on quantification of big images like whole slide scans. It offers sophisticated image analysis algorithms. Of those, tissue quantification using machine learning techniques, object/cell segmentation, and object classification are the basic ones. We demonstrate how to integrate Orbit and OMERO using both the User Interface and the API. For more details, go to http://www.orbit.bio/
Changes to the documentation or the materials should be made directly in the omero-guide-orbit repository.